Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia aldovae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia aldovae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia aldovae
NCBI Strain Identifiers IP23238
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000173735.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 78
N50 Contigs 143,926 bp
Longest Contig 350,466 bp
Scaffold Count 72
N50 Scaffolds 153,140 bp
Longest Scaffold 350,466 bp
Genome Size 4,605,721 bp
Protein Count 4,235
Coding Density 85.51%
GC Percentage 47.59%
Ambiguous Bases 1
GTDB representative GCA_000173735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8016_2#87
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1486379
Country France
Date 2015-7-16
Genbank Assembly Accession GCA_001164505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,262
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 6
Species Taxid 29483
SSU Count 2
Submitter SC
Taxid 29483
Total Gap Length 323
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CQCP00000000.1