Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DE-NI-032
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 35
N50 Contigs 117,895 bp
Longest Contig 343,656 bp
Scaffold Count 31
N50 Scaffolds 125,181 bp
Longest Scaffold 343,656 bp
Genome Size 2,099,249 bp
Protein Count 2,086
Coding Density 88.93%
GC Percentage 35.30%
Ambiguous Bases 13
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_6#24
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031434
Country Germany
Date 2015-7-16
Genbank Assembly Accession GCA_001162445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,110
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 4
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 99
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CQAV00000000.1