Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers IP06077
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 197
N50 Contigs 68,179 bp
Longest Contig 237,708 bp
Scaffold Count 159
N50 Scaffolds 70,225 bp
Longest Scaffold 289,375 bp
Genome Size 4,594,630 bp
Protein Count 4,430
Coding Density 84.59%
GC Percentage 46.83%
Ambiguous Bases 1
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8016_2#85
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1486408
Country France
Date 2015-7-16
Genbank Assembly Accession GCA_001160045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,353
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 38
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 3608
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPYG00000000.1