Yersinia enterocolitica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers ERL082756
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 118
N50 Contigs 92,528 bp
Longest Contig 317,044 bp
Scaffold Count 116
N50 Scaffolds 92,528 bp
Longest Scaffold 317,044 bp
Genome Size 4,522,579 bp
Protein Count 4,114
Coding Density 85.14%
GC Percentage 46.85%
Ambiguous Bases 9
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_3#6
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980218
Country New Zealand
Date 2015-7-16
Genbank Assembly Accession GCA_001150845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 4,195
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 2
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 41
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPYM00000000.1