Neisseria gonorrhoeae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria gonorrhoeae
NCBI Strain Identifiers GCGS030
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003315235.1)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 55,634 bp
Longest Contig 209,778 bp
Scaffold Count 81
N50 Scaffolds 55,634 bp
Longest Scaffold 209,778 bp
Genome Size 2,141,032 bp
Protein Count 2,156
Coding Density 83.76%
GC Percentage 52.39%
Ambiguous Bases 10
GTDB representative GCA_003315235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8289_2#30
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1690360
Country USA: San Diego
Date 2015-7-16
Genbank Assembly Accession GCA_001150765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urethra
Latitude Longitude None
Molecule Count N/A
CDS Count 2,451
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 1
Species Taxid 485
SSU Count 1
Submitter SC
Taxid 485
Total Gap Length 10
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CQMH00000000.1