Yersinia kristensenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia kristensenii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia kristensenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia kristensenii
NCBI Strain Identifiers FCF326
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460525.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 65
N50 Contigs 117,141 bp
Longest Contig 261,450 bp
Scaffold Count 37
N50 Scaffolds 207,977 bp
Longest Scaffold 492,295 bp
Genome Size 4,631,731 bp
Protein Count 4,180
Coding Density 86.19%
GC Percentage 47.35%
Ambiguous Bases 17
GTDB representative GCA_900460525.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4821_5#7
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA859960
Country Brazil
Date 2015-7-16
Genbank Assembly Accession GCA_001134585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source polluted water
Latitude Longitude None
Molecule Count N/A
CDS Count 4,233
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 28
Species Taxid 28152
SSU Count 2
Submitter SC
Taxid 28152
Total Gap Length 873
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPYI00000000.1