Streptococcus agalactiae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers IT-NI-032
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 42
N50 Contigs 81,447 bp
Longest Contig 296,419 bp
Scaffold Count 35
N50 Scaffolds 125,940 bp
Longest Scaffold 296,419 bp
Genome Size 2,114,091 bp
Protein Count 2,146
Coding Density 89.04%
GC Percentage 35.49%
Ambiguous Bases 13
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_7#17
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031467
Country Italy
Date 2015-7-16
Genbank Assembly Accession GCA_001133525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,156
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 7
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 160
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CQES00000000.1