Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers DK-NI-021
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 99.86%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 33
N50 Contigs 91,868 bp
Longest Contig 334,328 bp
Scaffold Count 29
N50 Scaffolds 102,256 bp
Longest Scaffold 334,328 bp
Genome Size 2,049,361 bp
Protein Count 2,008
Coding Density 88.88%
GC Percentage 35.28%
Ambiguous Bases 11
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_5#21
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031525
Country Denmark
Date 2015-7-16
Genbank Assembly Accession GCA_001108745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,039
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 4
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 136
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPVS00000000.1