Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers IT-NI-009
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 36
N50 Contigs 95,464 bp
Longest Contig 334,311 bp
Scaffold Count 28
N50 Scaffolds 124,638 bp
Longest Scaffold 334,311 bp
Genome Size 2,093,402 bp
Protein Count 2,077
Coding Density 88.93%
GC Percentage 35.29%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6630_7#10
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031424
Country Italy
Date 2015-7-16
Genbank Assembly Accession GCA_001106525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 2,098
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 8
Species Taxid 1311
SSU Count 1
Submitter SC
Taxid 1311
Total Gap Length 212
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPZS00000000.1