Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pseudotuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pseudotuberculosis
NCBI Strain Identifiers IH111554
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900460465.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 197
N50 Contigs 52,948 bp
Longest Contig 187,250 bp
Scaffold Count 135
N50 Scaffolds 78,602 bp
Longest Scaffold 251,492 bp
Genome Size 4,686,583 bp
Protein Count 4,177
Coding Density 84.34%
GC Percentage 47.47%
Ambiguous Bases 65
GTDB representative GCA_900460465.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4821_8#12
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA859877
Country Finland
Date 2015-7-16
Genbank Assembly Accession GCA_001104045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,318
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 62
Species Taxid 633
SSU Count 1
Submitter SC
Taxid 633
Total Gap Length 3652
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPWK00000000.1