Yersinia enterocolitica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers SZ5108/01;SZ5108;01
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 86
N50 Contigs 110,351 bp
Longest Contig 461,226 bp
Scaffold Count 82
N50 Scaffolds 111,379 bp
Longest Scaffold 512,756 bp
Genome Size 4,384,969 bp
Protein Count 3,946
Coding Density 85.53%
GC Percentage 47.19%
Ambiguous Bases 6
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_7#7
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980187
Country Germany
Date 2015-7-16
Genbank Assembly Accession GCA_001103745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 3,990
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 4
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 128
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPZL00000000.1