Yersinia enterocolitica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers YE53/30444;YE53;30444
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 46
N50 Contigs 208,653 bp
Longest Contig 384,017 bp
Scaffold Count 38
N50 Scaffolds 269,052 bp
Longest Scaffold 687,903 bp
Genome Size 4,751,541 bp
Protein Count 4,339
Coding Density 86.72%
GC Percentage 47.08%
Ambiguous Bases 19
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_7#9
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980198
Country Germany
Date 2015-7-16
Genbank Assembly Accession GCA_001102905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,396
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 8
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 173
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CQEI00000000.1