Neisseria meningitidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Neisseria; s__Neisseria meningitidis
NCBI Strain Identifiers NM2009
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900638555.1)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 179
N50 Contigs 28,372 bp
Longest Contig 105,226 bp
Scaffold Count 176
N50 Scaffolds 28,588 bp
Longest Scaffold 105,226 bp
Genome Size 2,053,121 bp
Protein Count 2,005
Coding Density 84.73%
GC Percentage 52.06%
Ambiguous Bases 2
GTDB representative GCA_900638555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 6714_2#23
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1031641
Country Ghana: Kassena Nankana District
Date 2015-7-14
Genbank Assembly Accession GCA_001100325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source CSF
Latitude Longitude None
Molecule Count N/A
CDS Count 2,282
Refseq Category na
Seq Rel Date 2015/07/14
Spanned Gaps 3
Species Taxid 487
SSU Count 1
Submitter SC
Taxid 487
Total Gap Length 95
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CMYG00000000.1