| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia frederiksenii_C |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia frederiksenii |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia frederiksenii |
| NCBI Strain Identifiers | FE80258 |
| GTDB Type Material Designation | not type material |
| GTDB Representative of Species | True (11 genomes in species cluster) |
| CheckM Completeness | 99.95% |
|---|---|
| CheckM Contamination | 0.0% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 3 |
| 16S Count | 1 |
| 23S Count | 2 |
| tRNA Count | 18 |
| Contig Count | 22 |
| N50 Contigs | 449,491 bp |
| Longest Contig | 1,165,697 bp |
| Scaffold Count | 21 |
| N50 Scaffolds | 449,491 bp |
| Longest Scaffold | 1,165,697 bp |
| Genome Size | 4,928,829 bp |
| Protein Count | 4,439 |
| Coding Density | 86.19% |
| GC Percentage | 47.45% |
| Ambiguous Bases | 3 |
| GTDB representative of species | True |
| Assembly Level | Scaffold |
|---|---|
| Assembly Name | 5139_5#4 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMEA859959 |
| Country | Finland |
| Date | 2015-7-16 |
| Genbank Assembly Accession | GCA_001098625.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | faeces |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 4,481 |
| Refseq Category | na |
| Seq Rel Date | 2015/07/16 |
| Spanned Gaps | 1 |
| Species Taxid | 29484 |
| SSU Count | 1 |
| Submitter | SC |
| Taxid | 29484 |
| Total Gap Length | 34 |
| Translation Table | 11 |
| tRNA Count (total) | 68 |
| Type Material | None |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | CPWN00000000.1 |