Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers ATCC 27853
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 21
N50 Contigs 2,097,247 bp
Longest Contig 2,108,254 bp
Scaffold Count 21
N50 Scaffolds 2,097,247 bp
Longest Scaffold 2,108,254 bp
Genome Size 6,847,745 bp
Protein Count 6,324
Coding Density 89.37%
GC Percentage 66.08%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM108662v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03787331
Country USA: Rochester; Minnesota
Date 2015-7-17
Genbank Assembly Accession GCA_001086625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Associated Infection
Latitude Longitude 44.0234 N 92.4630 W
Molecule Count N/A
CDS Count 6,503
Refseq Category na
Seq Rel Date 2015/07/17
Spanned Gaps 0
Species Taxid 287
SSU Count 4
Submitter The Mayo Clinic
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFMN00000000.1