Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers ERL08708
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 99.95%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 52
N50 Contigs 206,388 bp
Longest Contig 646,998 bp
Scaffold Count 42
N50 Scaffolds 206,388 bp
Longest Scaffold 646,998 bp
Genome Size 4,592,664 bp
Protein Count 4,162
Coding Density 86.47%
GC Percentage 47.06%
Ambiguous Bases 6
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 4976_6#7
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA980132
Country New Zealand
Date 2015-7-16
Genbank Assembly Accession GCA_001086525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,190
Refseq Category na
Seq Rel Date 2015/07/16
Spanned Gaps 10
Species Taxid 630
SSU Count 1
Submitter SC
Taxid 630
Total Gap Length 269
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CPZT00000000.1