Riemerella anatipestifer
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Riemerella; s__Riemerella anatipestifer
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Riemerella; s__Riemerella anatipestifer
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Riemerella; s__Riemerella anatipestifer; x__Riemerella anatipestifer Yb2
NCBI Strain Identifiers Yb2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000252855.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,184,066 bp
Longest Contig 2,184,066 bp
Scaffold Count 1
N50 Scaffolds 2,184,066 bp
Longest Scaffold 2,184,066 bp
Genome Size 2,184,066 bp
Protein Count 2,053
Coding Density 90.82%
GC Percentage 35.01%
Ambiguous Bases N/A
GTDB representative GCA_000252855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM107779v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03768359
Country None
Date 2015-7-14
Genbank Assembly Accession GCA_001077795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,044
Refseq Category na
Seq Rel Date 2015/07/14
Spanned Gaps 0
Species Taxid 34085
SSU Count 2
Submitter Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences
Taxid 1455062
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None