GCF_001077535.1
Clostridioides difficile
Isolate HQ 5S/16S/23S 20 tRNAs
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 2
N50 Contigs 4,109,692 bp
Longest Contig 4,109,692 bp
Scaffold Count 2
N50 Scaffolds 4,109,692 bp
Longest Scaffold 4,109,692 bp
Genome Size 4,154,879 bp
Protein Count 3,680
Coding Density 82.53%
GC Percentage 28.77%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM107753v2
Assembly Type na
Bioproject PRJNA224116
Biosample SAMN03486969
Country None
Date 2015-07-08
Genbank Assembly Accession GCA_001077535.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 3,762
Refseq Category na
Seq Rel Date 2015/07/08
Spanned Gaps 0
Species Taxid 1496
SSU Count 12
Submitter Goettingen Genomics Laboratory
Taxid 1121308
Total Gap Length 0
Translation Table 11
tRNA Count (total) 89
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None