Eikenella corrodens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
NCBI Strain Identifiers 491_NMEN
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 96.04%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 119
N50 Contigs 43,171 bp
Longest Contig 118,308 bp
Scaffold Count 106
N50 Scaffolds 44,373 bp
Longest Scaffold 118,308 bp
Genome Size 2,361,428 bp
Protein Count 2,308
Coding Density 82.50%
GC Percentage 55.66%
Ambiguous Bases 6
GTDB representative GCF_900187105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107678v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197684
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001076785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,285
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 13
Species Taxid 539
SSU Count 7
Submitter University of Washington
Taxid 539
Total Gap Length 527
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVFA00000000.1