Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 549_PAER
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 37.5
5S Count 4
16S Count 4
23S Count 4
tRNA Count 17
Contig Count 229
N50 Contigs 73,974 bp
Longest Contig 314,501 bp
Scaffold Count 203
N50 Scaffolds 86,472 bp
Longest Scaffold 333,473 bp
Genome Size 6,957,846 bp
Protein Count 6,495
Coding Density 89.02%
GC Percentage 65.90%
Ambiguous Bases 72
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107654v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197747
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001076545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,675
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 26
Species Taxid 287
SSU Count 4
Submitter University of Washington
Taxid 287
Total Gap Length 2089
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVCP00000000.1