Staphylococcus capitis
Isolate HQ 5S/16S/23S 11 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
NCBI Strain Identifiers 562_SWAR
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902325.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 3
23S Count 1
tRNA Count 11
Contig Count 43
N50 Contigs 230,830 bp
Longest Contig 383,306 bp
Scaffold Count 39
N50 Scaffolds 248,630 bp
Longest Scaffold 383,306 bp
Genome Size 2,509,044 bp
Protein Count 2,406
Coding Density 85.89%
GC Percentage 32.68%
Ambiguous Bases 19
GTDB representative GCA_002902325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107336v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197762
Country USA: WA
Date 2015-07-10
Genbank Assembly Accession GCA_001073365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,421
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 4
Species Taxid 29388
SSU Count 3
Submitter University of Washington
Taxid 29388
Total Gap Length 53
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVCA00000000.1