Streptococcus salivarius
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. 449_SSPC
NCBI Strain Identifiers 449_SSPC
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 19
Contig Count 33
N50 Contigs 182,941 bp
Longest Contig 447,418 bp
Scaffold Count 31
N50 Scaffolds 182,941 bp
Longest Scaffold 447,418 bp
Genome Size 2,095,754 bp
Protein Count 1,902
Coding Density 88.08%
GC Percentage 40.08%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107300v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197641
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001073005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,910
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 2
Species Taxid 1579339
SSU Count 3
Submitter University of Washington
Taxid 1579339
Total Gap Length 118
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVGR00000000.1