Stenotrophomonas maltophilia_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers 424_SMAL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004346925.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.82%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 80
N50 Contigs 95,694 bp
Longest Contig 244,634 bp
Scaffold Count 68
N50 Scaffolds 113,267 bp
Longest Scaffold 324,087 bp
Genome Size 5,202,479 bp
Protein Count 4,816
Coding Density 88.21%
GC Percentage 65.70%
Ambiguous Bases 47
GTDB representative GCA_004346925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107291v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197617
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001072915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,795
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 12
Species Taxid 40324
SSU Count 2
Submitter University of Washington
Taxid 40324
Total Gap Length 594
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVHP00000000.1