Stenotrophomonas geniculata
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas geniculata
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers 22_SMAL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001431625.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 42
N50 Contigs 210,318 bp
Longest Contig 494,818 bp
Scaffold Count 38
N50 Scaffolds 288,290 bp
Longest Scaffold 716,879 bp
Genome Size 4,457,527 bp
Protein Count 3,993
Coding Density 89.23%
GC Percentage 66.51%
Ambiguous Bases 9
GTDB representative GCA_001431625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107181v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197412
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001071815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,008
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 4
Species Taxid 40324
SSU Count 4
Submitter University of Washington
Taxid 40324
Total Gap Length 235
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVPM00000000.1