Streptococcus parasanguinis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus parasanguinis
NCBI Strain Identifiers 451_SPAR
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000164675.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 41
N50 Contigs 127,564 bp
Longest Contig 340,045 bp
Scaffold Count 38
N50 Scaffolds 127,564 bp
Longest Scaffold 340,045 bp
Genome Size 2,196,734 bp
Protein Count 2,072
Coding Density 87.87%
GC Percentage 41.50%
Ambiguous Bases 20
GTDB representative GCA_000164675.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107115v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197643
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001071155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,096
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 3
Species Taxid 1318
SSU Count 5
Submitter University of Washington
Taxid 1318
Total Gap Length 128
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVGP00000000.1