Stenotrophomonas maltophilia_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers 32_SMAL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_004346925.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.82%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 117
N50 Contigs 72,990 bp
Longest Contig 223,714 bp
Scaffold Count 104
N50 Scaffolds 88,601 bp
Longest Scaffold 243,708 bp
Genome Size 5,198,613 bp
Protein Count 4,828
Coding Density 88.21%
GC Percentage 65.70%
Ambiguous Bases 23
GTDB representative GCA_004346925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107086v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197510
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001070865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,792
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 13
Species Taxid 40324
SSU Count 2
Submitter University of Washington
Taxid 40324
Total Gap Length 1045
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVLS00000000.1