Stenotrophomonas maltophilia_Q
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_Q
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers 259_SMAL
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002799165.1)
Genome Characteristics
CheckM Completeness 99.41%
CheckM Contamination 1.94%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 351
N50 Contigs 28,987 bp
Longest Contig 165,669 bp
Scaffold Count 322
N50 Scaffolds 30,498 bp
Longest Scaffold 176,253 bp
Genome Size 4,844,119 bp
Protein Count 4,587
Coding Density 88.75%
GC Percentage 66.13%
Ambiguous Bases 133
GTDB representative GCA_002799165.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107078v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197451
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001070785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,569
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 29
Species Taxid 40324
SSU Count 1
Submitter University of Washington
Taxid 40324
Total Gap Length 2466
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVNZ00000000.1