Streptococcus salivarius
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers 140_SSAL
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 0.73%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 169
N50 Contigs 39,642 bp
Longest Contig 115,138 bp
Scaffold Count 166
N50 Scaffolds 41,436 bp
Longest Scaffold 115,138 bp
Genome Size 2,262,337 bp
Protein Count 2,167
Coding Density 88.15%
GC Percentage 39.82%
Ambiguous Bases 5
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM107059v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197330
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001070595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,134
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 3
Species Taxid 1304
SSU Count 2
Submitter University of Washington
Taxid 1304
Total Gap Length 130
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVSQ00000000.1