Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 12 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
NCBI Strain Identifiers 1032_SEPI
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.77%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 12
Contig Count 390
N50 Contigs 60,868 bp
Longest Contig 263,554 bp
Scaffold Count 390
N50 Scaffolds 60,868 bp
Longest Scaffold 263,554 bp
Genome Size 2,536,021 bp
Protein Count 2,469
Coding Density 82.65%
GC Percentage 32.95%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM107001v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03196997
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001070015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,612
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 0
Species Taxid 1282
SSU Count 2
Submitter University of Washington
Taxid 1282
Total Gap Length 0
Translation Table 11
tRNA Count (total) 28
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWFL00000000.1