Staphylococcus epidermidis
Isolate HQ 16S/23S 12 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
NCBI Strain Identifiers 1021.rep1_SEPI
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742205.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 12
Contig Count 146
N50 Contigs 51,539 bp
Longest Contig 206,420 bp
Scaffold Count 145
N50 Scaffolds 51,539 bp
Longest Scaffold 206,420 bp
Genome Size 2,597,619 bp
Protein Count 2,490
Coding Density 83.95%
GC Percentage 31.91%
Ambiguous Bases N/A
GTDB representative GCA_006742205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106992v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03196984
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001069925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,570
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 1
Species Taxid 1282
SSU Count 1
Submitter University of Washington
Taxid 1282
Total Gap Length 100
Translation Table 11
tRNA Count (total) 26
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWFY00000000.1