Streptococcus salivarius
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers 1003_SOLI
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 144
N50 Contigs 63,957 bp
Longest Contig 150,003 bp
Scaffold Count 144
N50 Scaffolds 63,957 bp
Longest Scaffold 150,003 bp
Genome Size 2,095,569 bp
Protein Count 1,972
Coding Density 88.89%
GC Percentage 40.02%
Ambiguous Bases 8
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM106985v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03196965
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001069855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,965
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 0
Species Taxid 1304
SSU Count 1
Submitter University of Washington
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWGR00000000.1