Rothia sp001808955
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Rothia; s__Rothia sp001808955
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Rothia; s__Rothia mucilaginosa
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Rothia; s__Rothia mucilaginosa
NCBI Strain Identifiers 902_RMUC
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001808955.1)
Genome Characteristics
CheckM Completeness 99.33%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 66
N50 Contigs 90,270 bp
Longest Contig 318,350 bp
Scaffold Count 66
N50 Scaffolds 90,270 bp
Longest Scaffold 318,350 bp
Genome Size 2,264,347 bp
Protein Count 1,751
Coding Density 83.34%
GC Percentage 59.63%
Ambiguous Bases N/A
GTDB representative GCA_001808955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM106785v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03198110
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001067855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,742
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 0
Species Taxid 43675
SSU Count 1
Submitter University of Washington
Taxid 43675
Total Gap Length 0
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUOQ00000000.1