Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 792_PAER
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 384
N50 Contigs 37,589 bp
Longest Contig 212,024 bp
Scaffold Count 372
N50 Scaffolds 39,589 bp
Longest Scaffold 212,024 bp
Genome Size 6,486,169 bp
Protein Count 6,232
Coding Density 89.69%
GC Percentage 66.40%
Ambiguous Bases 5
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106739v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03198004
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001067395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,338
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 12
Species Taxid 287
SSU Count 1
Submitter University of Washington
Taxid 287
Total Gap Length 1200
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUSS00000000.1