Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 545_PAER
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 169
N50 Contigs 76,149 bp
Longest Contig 269,550 bp
Scaffold Count 127
N50 Scaffolds 139,606 bp
Longest Scaffold 269,550 bp
Genome Size 6,566,286 bp
Protein Count 6,103
Coding Density 88.90%
GC Percentage 66.04%
Ambiguous Bases 64
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106539v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197743
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001065395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,252
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 42
Species Taxid 287
SSU Count 6
Submitter University of Washington
Taxid 287
Total Gap Length 2992
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVCT00000000.1