Undefined name (Failed Quality Check)
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy Undefined (Failed Quality Check)
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 150_PMEN
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.41%
CheckM Contamination 2.65%
CheckM Strain Heterogeneity 14.29
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 1,772
N50 Contigs 6,874 bp
Longest Contig 36,360 bp
Scaffold Count 1,755
N50 Scaffolds 6,944 bp
Longest Scaffold 36,360 bp
Genome Size 6,208,712 bp
Protein Count 7,021
Coding Density 89.51%
GC Percentage 66.50%
Ambiguous Bases 67
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106283v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197340
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001062835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,005
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 17
Species Taxid 287
SSU Count 1
Submitter University of Washington
Taxid 287
Total Gap Length 1615
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVSG00000000.1