Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 1267_PMEN
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 389
N50 Contigs 44,208 bp
Longest Contig 155,685 bp
Scaffold Count 387
N50 Scaffolds 44,367 bp
Longest Scaffold 155,685 bp
Genome Size 6,737,888 bp
Protein Count 6,489
Coding Density 89.49%
GC Percentage 66.20%
Ambiguous Bases 15
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106256v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197235
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001062565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,621
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 2
Species Taxid 287
SSU Count 2
Submitter University of Washington
Taxid 287
Total Gap Length 200
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVWH00000000.1