Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Proteus; s__Proteus mirabilis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Morganellaceae; g__Proteus; s__Proteus mirabilis
NCBI Strain Identifiers 1166_PMIR
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000160755.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 2
tRNA Count 17
Contig Count 115
N50 Contigs 114,393 bp
Longest Contig 215,635 bp
Scaffold Count 113
N50 Scaffolds 114,393 bp
Longest Scaffold 215,635 bp
Genome Size 3,855,586 bp
Protein Count 3,456
Coding Density 85.58%
GC Percentage 38.42%
Ambiguous Bases 21
GTDB representative GCA_000160755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106213v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197123
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001062135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,466
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 2
Species Taxid 584
SSU Count 3
Submitter University of Washington
Taxid 584
Total Gap Length 200
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWAP00000000.1