Staphylococcus capitis
Isolate HQ 16S/23S 8 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
NCBI Strain Identifiers 129_SAUR
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902325.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 1.59%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 4
tRNA Count 8
Contig Count 197
N50 Contigs 129,562 bp
Longest Contig 398,646 bp
Scaffold Count 194
N50 Scaffolds 129,562 bp
Longest Scaffold 398,646 bp
Genome Size 2,599,713 bp
Protein Count 2,610
Coding Density 86.32%
GC Percentage 32.89%
Ambiguous Bases 1
GTDB representative GCA_002902325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106081v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197261
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001060815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,551
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 3
Species Taxid 29388
SSU Count 3
Submitter University of Washington
Taxid 29388
Total Gap Length 210
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVVH00000000.1