Serratia marcescens_I
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Serratia; s__Serratia marcescens_I
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Shigella; s__Shigella boydii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Shigella; s__Shigella boydii
NCBI Strain Identifiers 1252_SBOY
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003186475.1)
Genome Characteristics
CheckM Completeness 99.71%
CheckM Contamination 1.9%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 1
tRNA Count 15
Contig Count 246
N50 Contigs 48,190 bp
Longest Contig 194,816 bp
Scaffold Count 243
N50 Scaffolds 48,190 bp
Longest Scaffold 194,816 bp
Genome Size 5,249,883 bp
Protein Count 5,050
Coding Density 87.48%
GC Percentage 59.46%
Ambiguous Bases 4
GTDB representative GCA_003186475.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM106069v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197219
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001060695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,113
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 3
Species Taxid 621
SSU Count 3
Submitter University of Washington
Taxid 621
Total Gap Length 214
Translation Table 11
tRNA Count (total) 27
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVWX00000000.1