Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers 1046_PAER
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.16%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 337
N50 Contigs 49,324 bp
Longest Contig 345,929 bp
Scaffold Count 337
N50 Scaffolds 49,324 bp
Longest Scaffold 345,929 bp
Genome Size 6,478,321 bp
Protein Count 6,131
Coding Density 89.76%
GC Percentage 66.28%
Ambiguous Bases 4
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM106018v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197012
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001060185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,272
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 0
Species Taxid 287
SSU Count 1
Submitter University of Washington
Taxid 287
Total Gap Length 0
Translation Table 11
tRNA Count (total) 31
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JWEW00000000.1