Corynebacterium sp001807485
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium sp001807485
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium jeikeium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium jeikeium
NCBI Strain Identifiers 931_CJEI
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001807485.1)
Genome Characteristics
CheckM Completeness 99.21%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 60
N50 Contigs 140,894 bp
Longest Contig 213,668 bp
Scaffold Count 57
N50 Scaffolds 140,894 bp
Longest Scaffold 213,668 bp
Genome Size 2,285,454 bp
Protein Count 1,983
Coding Density 89.85%
GC Percentage 62.97%
Ambiguous Bases 5
GTDB representative GCA_001807485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM105938v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03198150
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001059385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,983
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 3
Species Taxid 38289
SSU Count 1
Submitter University of Washington
Taxid 38289
Total Gap Length 218
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUNC00000000.1