Clostridium paraputrificum
Isolate HQ 16S/23S 11 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium paraputrificum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium botulinum
NCBI Strain Identifiers 713_CBOT
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900447045.1)
Genome Characteristics
CheckM Completeness 98.79%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 11
Contig Count 191
N50 Contigs 41,974 bp
Longest Contig 141,760 bp
Scaffold Count 191
N50 Scaffolds 41,974 bp
Longest Scaffold 141,760 bp
Genome Size 3,551,054 bp
Protein Count 3,418
Coding Density 88.28%
GC Percentage 29.80%
Ambiguous Bases 2
GTDB representative GCA_900447045.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM105811v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197918
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001058115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,336
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 0
Species Taxid 1491
SSU Count 2
Submitter University of Washington
Taxid 1491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 18
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUWA00000000.1