Klebsiella_A oxytoca
Isolate HQ 5S/16S/23S 13 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella_A; s__Klebsiella_A oxytoca
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella oxytoca
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella oxytoca
NCBI Strain Identifiers 582_KOXY
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001598695.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 4
23S Count 2
tRNA Count 13
Contig Count 258
N50 Contigs 51,193 bp
Longest Contig 163,102 bp
Scaffold Count 245
N50 Scaffolds 52,057 bp
Longest Scaffold 163,102 bp
Genome Size 5,964,640 bp
Protein Count 5,618
Coding Density 87.92%
GC Percentage 55.01%
Ambiguous Bases 31
GTDB representative GCA_001598695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM105740v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03197783
Country USA: WA
Date 2015-7-10
Genbank Assembly Accession GCA_001057405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,742
Refseq Category na
Seq Rel Date 2015/07/10
Spanned Gaps 13
Species Taxid 571
SSU Count 4
Submitter University of Washington
Taxid 571
Total Gap Length 1300
Translation Table 11
tRNA Count (total) 34
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JVBF00000000.1