Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia similis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia similis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia similis
NCBI Strain Identifiers Y228
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (6 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 0.87%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 104
N50 Contigs 136,925 bp
Longest Contig 372,680 bp
Scaffold Count 104
N50 Scaffolds 136,925 bp
Longest Scaffold 372,680 bp
Genome Size 4,853,786 bp
Protein Count 4,399
Coding Density 83.91%
GC Percentage 46.83%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 5139_1#3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA859916
Country Germany
Date 2015-4-3
Genbank Assembly Accession GCA_001053095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not known
Latitude Longitude None
Molecule Count N/A
CDS Count 4,493
Refseq Category na
Seq Rel Date 2015/04/03
Spanned Gaps 0
Species Taxid 367190
SSU Count 1
Submitter SC
Taxid 367190
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CGBP00000000.1