Vibrio nigripulchritudo
Isolate HQ 16S/23S 7 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio nigripulchritudo
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio nigripulchritudo
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio nigripulchritudo; x__Vibrio nigripulchritudo ENn2
NCBI Strain Identifiers ENn2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000222685.2)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 3.89%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 7
Contig Count 117
N50 Contigs 121,803 bp
Longest Contig 435,507 bp
Scaffold Count 117
N50 Scaffolds 121,803 bp
Longest Scaffold 435,507 bp
Genome Size 6,445,886 bp
Protein Count 5,799
Coding Density 88.65%
GC Percentage 45.81%
Ambiguous Bases N/A
GTDB representative GCA_000222685.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM105063v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3146274
Country None
Date 2013-10-2
Genbank Assembly Accession GCA_001050635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,770
Refseq Category na
Seq Rel Date 2013/10/02
Spanned Gaps 0
Species Taxid 28173
SSU Count 2
Submitter Genoscope CEA
Taxid 1238432
Total Gap Length 0
Translation Table 11
tRNA Count (total) 11
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CANV00000000.1