Rubeoparvulum massiliense
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Rubeoparvulales; f__Rubeoparvulaceae; g__Rubeoparvulum; s__Rubeoparvulum massiliense
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Rubeoparvulum; s__Rubeoparvulum massiliense
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Rubeoparvulum; s__Rubeoparvulum massiliense
NCBI Strain Identifiers mt6
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.46%
CheckM Contamination 2.05%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 6
N50 Contigs 556,160 bp
Longest Contig 1,233,124 bp
Scaffold Count 6
N50 Scaffolds 556,160 bp
Longest Scaffold 1,233,124 bp
Genome Size 2,843,796 bp
Protein Count 2,735
Coding Density 87.69%
GC Percentage 43.76%
Ambiguous Bases 2
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Rubeoparvulum massiliensis
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3375520
Country None
Date 2015-6-30
Genbank Assembly Accession GCA_001049895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,701
Refseq Category representative genome
Seq Rel Date 2015/06/30
Spanned Gaps 0
Species Taxid 1631346
SSU Count 1
Submitter URMITE
Taxid 1631346
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CVPE00000000.1