| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio crassostreae |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio crassostreae |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio crassostreae |
| NCBI Strain Identifiers | LGP7 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | True (79 genomes in species cluster) |
| CheckM Completeness | 99.87% |
|---|---|
| CheckM Contamination | 0.59% |
| CheckM Strain Heterogeneity | 25.0 |
| 5S Count | 0 |
| 16S Count | 2 |
| 23S Count | 2 |
| tRNA Count | 18 |
| Contig Count | 122 |
| N50 Contigs | 270,473 bp |
| Longest Contig | 665,314 bp |
| Scaffold Count | 122 |
| N50 Scaffolds | 270,473 bp |
| Longest Scaffold | 665,314 bp |
| Genome Size | 5,630,363 bp |
| Protein Count | 5,042 |
| Coding Density | 85.68% |
| GC Percentage | 44.24% |
| Ambiguous Bases | 2 |
| GTDB representative of species | True |
| Assembly Level | Contig |
|---|---|
| Assembly Name | VLGP7_PRJEB5883 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMEA2591296 |
| Country | None |
| Date | 2015-6-30 |
| Genbank Assembly Accession | GCA_001048535.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | None |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 5,014 |
| Refseq Category | na |
| Seq Rel Date | 2015/06/30 |
| Spanned Gaps | 0 |
| Species Taxid | 246167 |
| SSU Count | 2 |
| Submitter | STATION BIOLOGIQUE DE ROSCOFF |
| Taxid | 246167 |
| Total Gap Length | 0 |
| Translation Table | 11 |
| tRNA Count (total) | 78 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | CCJW00000000.1 |