Fructobacillus tropaeoli
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Fructobacillus; s__Fructobacillus tropaeoli
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Fructobacillus; s__Fructobacillus tropaeoli
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Fructobacillus; s__Fructobacillus tropaeoli
NCBI Strain Identifiers F214-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.99%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 122
N50 Contigs 84,243 bp
Longest Contig 226,443 bp
Scaffold Count 101
N50 Scaffolds 226,443 bp
Longest Scaffold 368,481 bp
Genome Size 1,686,944 bp
Protein Count 1,714
Coding Density 86.90%
GC Percentage 44.20%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM104713v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031994
Country None
Date 2015-6-25
Genbank Assembly Accession GCA_001047135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,664
Refseq Category na
Seq Rel Date 2015/06/25
Spanned Gaps 21
Species Taxid 709323
SSU Count 1
Submitter Faculty of Bioindustry, Tokyo University of Agriculture
Taxid 709323
Total Gap Length 1822
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBXT00000000.1