Fructobacillus pseudoficulneus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Fructobacillus; s__Fructobacillus pseudoficulneus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Fructobacillus; s__Fructobacillus pseudoficulneus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Fructobacillus; s__Fructobacillus pseudoficulneus
NCBI Strain Identifiers DSM 15468
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900108455.1)
Genome Characteristics
CheckM Completeness 97.95%
CheckM Contamination 0.52%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 41
N50 Contigs 64,164 bp
Longest Contig 157,993 bp
Scaffold Count 15
N50 Scaffolds 283,981 bp
Longest Scaffold 463,550 bp
Genome Size 1,413,733 bp
Protein Count 1,330
Coding Density 88.36%
GC Percentage 44.46%
Ambiguous Bases N/A
GTDB representative GCA_900108455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM104711v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031993
Country None
Date 2015-6-25
Genbank Assembly Accession GCA_001047115.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,330
Refseq Category na
Seq Rel Date 2015/06/25
Spanned Gaps 26
Species Taxid 220714
SSU Count 1
Submitter Faculty of Bioindustry, Tokyo University of Agriculture
Taxid 220714
Total Gap Length 1869
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBXS00000000.1