Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers CA12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 2,840,312 bp
Longest Contig 2,840,312 bp
Scaffold Count 2
N50 Scaffolds 2,840,312 bp
Longest Scaffold 2,840,312 bp
Genome Size 2,865,366 bp
Protein Count 2,652
Coding Density 83.16%
GC Percentage 32.80%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM104579v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02767090
Country Colombia
Date 2015-10-23
Genbank Assembly Accession GCA_001045795.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bood
Latitude Longitude 10.24 N 75.30 W
Molecule Count 2
CDS Count 2,929
Refseq Category na
Seq Rel Date 2015/10/23
Spanned Gaps 0
Species Taxid 1280
SSU Count 6
Submitter South American MRSA Consortium
Taxid 1280
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None